Adam Hanif, M.D.

Publications:

Peer-Reviewed Journal Articles

• Hall D, Jain P, Semy S, Dienst J, Brown E, Dimopoulos I, Hanif AM, Heinke A, Reed A, Thavikulwat A, Bates K, Masnick M, Goetz K. Establishing a Synthetic Ocular Dataset for Research. (Submitted) 2025.
• Bulas S, Hanif AM, Thomas M. Branch retinal vein occlusion and peripheral nonperfusion associated with astrocytic hamartoma of the optic nerve head in a patient with tuberous sclerosis. Retinal Cases and Brief Reports. (Online ahead of print), 2024.
• Hanif AM, Thanos A. Retinopathy associated with Coxsackie B virus infection. JAMA Ophthalmology. 142(1):e234721, 2024.
• Hanif AM, Young BK, Jian Y, Campbell JP. Implementation of Optical Coherence Tomography for Retinopathy of Prematurity Screening. Current Opinion in Ophthalmology. 35(3):252-259, 2024.
• Hanif AM, Prajna V, Lalitha P, NaPier EM, Parker M, Steinkamp P, Keenan J, Campbell JP, Song X, Redd TK. Assessing the impact of image quality on deep learning classification of infectious keratitis. Ophthalmology Science. 3(4):100331, 2023.
• Hanif AM, Lu C, Singh P, Chang K, Coyner A, Brown J, Ostmo S, Chan RVP, Rubin D, Chiang MF, Campbell JP, Kalpathy-Cramer J. Federated learning for multi-center collaboration in ophthalmology: implications for clinical diagnosis and disease epidemiology. Ophthalmology Retina. 6(8):650-656,2022.
• Lu C, Hanif AM, Singh P, Chang K, Coyner A, Brown J, Ostmo S, Chan RVP, Rubin D, Chiang MF, Campbell JP, Kalpathy-Cramer J. Federated learning for multi-center collaboration in ophthalmology: improving classification performance in retinopathy of prematurity. Ophthalmology Retina. 6(8):657-663,2022.
• Hanif AM, Yildiz I, Tian P, Kalkanli B, Erdogmus D, Ioannidis S, Dy J, Kalpathy-Cramer J, Ostmo S, Jonas K, Chan RVP, Chiang MF, Campbell JP. Improved training efficiency for deep learning models using disease severity comparison labels. Ophthalmology Science. 2(2):100122, 2022.
• Meyer B, Williams P, Hanif AM, Lenhart P, Hubbard GB, Jain N. Proliferative retinopathy in a 13-year-old with Adams-Oliver syndrome. Retinal Cases and Brief Reports. 16(6):762-765, 2022.
• Hanif AM, Gensure RH, Scruggs BA, Anderson J, Campbell JP, Chiang MF. Prevalence of persistent avascular retina in patients with a history of retinopathy of prematurity screening without treatment. JAAPOS. 26(1):29-31,2021.
• Fu J, Aung MH, Prunty MC, Hanif AM, Hutson LM, Boatright JH, Pardue MT. Tauroursodeoxycholic acid protects visual function in a mouse model of type 1 diabetes. Pharmaceuticals. 13(8):1154, 2021.
• Hanif AM, Beqiri S, Keane P, Campbell JP. Applications of interpretability in deep learning models for ophthalmology. Current Opinion in Ophthalmology. 32(5):452-458, 2021.
• Lindeke-Myers A, Hanif AM, Jain N. Pentosan polysulfate maculopathy.Survey of Ophthalmology. 67(1):83-96, 2021.
• Barnes AC, Hanif AM, Jain N. Pentosan polysulfate maculopathy versus inherited macular dystrophies: comparative assessment with multimodal imaging. Ophthalmology Retina. 4(12):1196-1201, 2020.
• Hanif AM, Armenti ST, Taylor SC, Shah RA, Igelman AD, Jayasundera KT, Pennesi ME, Khurana RN, Foote JE, O’Keefe GA, Yang P, Hubbard GB, Hwang TS, Flaxel CJ, Stein JD, Yan J, Jain N. Phenotypic spectrum of pentosan polysulfate sodium-associate maculopathy: a multi-center study. JAMA Ophthalmology. 137(11):1275-1282, 2019.
• Hanif AM, Jain N. Late-stage Sorsby fundus dystrophy manifesting severe vision loss in the absence of choroidal neovascularization. Ophthalmic Surgery, Lasers and Imaging Retina. 50(8):e215-e217. 2019.
• Hanif AM, Shah R, Yan J, Varghese JS, Patel SA, Cribbs BE, O’Keefe G, Hendrick AM, Shantha JG, Hubbard GB, Patel PS, Rao P, Yeh S, Jain N. Strength of association between pentosan polysulfate and a novel maculopathy. Ophthalmology. 126(10):1464-1466, 2019.
• O’Keefe GD, Hanif AM, Mahajan V, Jain N. Early onset neovascular inflammatory vitreoretinopathy due to a de novo CAPN5 mutation: Report of a Case. Ocular Immunology and Inflammation. 27(5):706-708, 2019.
• Hanif AM, Yan J, Jain, N. Pattern dystrophy: An imprecise diagnosis in the age of precision medicine. International Ophthalmology Clinics. 59(1):173-194, 2019.
• Hanif AM, Saunders JA, Hawkins CM, Wojno TH, Kim HJ. Use of percutaneous bleomycin sclerotherapy for orbital lymphatic malformations. Orbit. 38(1):30-36, 2019.
• Pearce WA, Hanif AM, Jain N. Re: FDA BRUDAC 2018 Criteria for Interstitial Cystitis/Bladder Pain Syndrome Clinical Trials: Future Direction for Research: J. C. Nickel and R. Moldwin J Urol 2018;200:39-42. Journal of Urology. 200(5): 1122-1123, 2018.
• Allen RS, Hanif AM, Gogniat MA, Prall BC, Haider R, Aung MH, Prunty MC, Mees LM, Coulter MM, Motz CT, Boatright JH, Pardue MT. TrkB Signaling pathway mediates the protective effects of exercise in the diabetic rat retina. European Journal of Neuroscience. 47(10):1254-1265, 2018.
• Rha J, Jones SK, Fidler J, Banerjee A, Leung SW, Morris KJ, Wong JC, Inglis GAS, Shapiro L, Deng Q, Cutler AA, Hanif AM, Pardue MT, Schaffer A, Seyfried NT, Moberg KH, Bassell GJ, Escayg A, Garcia PS, Corbett AH. The RNA-binding Protein, ZC3H14, is Required for Proper Poly(A) Tail Length Control, Expression of Synaptic Proteins, and Brain Function in Mice. Human Molecular Genetics. 26(19):3663-3681, 2017.
• Hanif AM, Kim MK, Thomas JG, Ciavatta VT, Chrenek MA, Hetling JR, Pardue MT. Whole-eye electrical stimulation therapy preserves visual function and structure in P23H-1 Rats. Experimental Eye Research. 149:75-83, 2016.
• Hanif AM, Lawson EC, Prunty M, Gogniat M, Aung MH, Chakraborty R, Boatright JH, Pardue MT. Neuroprotective effects of voluntary exercise in an inherited retinal degeneration mouse model. Investigative Ophthalmology & Visual Science. 56:6839-6846, 2015.
• Chakraborty R, Park HN, Hanif AM, Sidhu CS, Iuvone PM, Pardue MT. ON pathway mutations increase susceptibility to form deprivation myopia. Experimental Eye Research.137:79-83, 2015.
• Prunty MC, Aung MG, Hanif AM, Allen R, Chrenek MA, Boatright JH, Thule PM, Kundu K, Murthy N, Pardue MT. In vivo imaging of retinal oxidative stress using a reactive oxygen species activated fluorescent probe. Investigative Ophthalmology & Visual Science. 56:5862-5870,2015.
• Lawson EC, Han MK, Sellers JT, Chrenek MA, Hanif AM, Gogniat MA, Boatright JH, Pardue MT. Aerobic Exercise Protects Retinal Function and Structure from Light-Induced Retinal Degeneration. The Journal of Neuroscience. 34:2406-2412, 2014.

Book Chapters

• Scruggs BA, Hanif AM, Chiang MF, Campbell JP. Artificial Intelligence in Retinopathy of Prematurity. In: Artificial Intelligence in Ophthalmology. Edited by Grzybowski A. (Forthcoming 2^nd Edition) 2024.
• Chrenek MA, Sellers JT, Lawson EC, Cunha PP, Johnson JL, Girardot PE, Kendal C, Han MK, Hanif AM, Ciavatta VT, Gogniat MA, Nickerson JM, Pardue MT, Boatright JH. Exercise and cyclic light preconditioning protect against light-induced retinal degeneration and evoke similar gene expression patterns. In: Retinal Degenerations: Mechanisms and Experimental Therapy, Edited by LaVail MM, Hollyfield JG, & Anderson RE, Advances in Experimental Medicine and Biology. Adv Exp Med Biol. 854:443-448, 2016.

Electronic Publications and Other Media

• Hanif AM, Young BK. Retinectomy under air. American Journal of Ophthalmology Case Reports. 2024.
• Hanif AM, Jain N. Clinical Pearls for a New Condition. Reviewofophthalmology.com. July 10, 2019.